Beginning with SEM in lavaan II

This post continues the getting started with structural equation modeling series inspired by Dawn Iacobucci’s article: Everything You Always Wanted to Know About SEM (Structural Equations Modeling) But Were Afraid to Ask. In the series, I translate Iacobucci’s LISREL syntax into R lavaan’s.

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Beginning with SEM in lavaan II

Beginning with SEM in lavaan

While reordering some old papers I rediscovered a paper by Dawn Iacobucci introducing structural equation modeling: Everything You Always Wanted to Know About SEM (Structural Equations Modeling) But Were Afraid to Ask. I liked Iacobucci’s introduction to SEM because it was eloquently written, clear and accessible. Moreover, Iacobucci accompanied the paper with a data-set and step-by-step explanation of the syntax to analyze it. This allowed the reproduction of her analysis to all the adventurous readers willing to start with structural equation modeling. Iacobucci used LISREL for the data-analysis and, at the time, I had no access to LISREL. Now, however, with lavaan available, when I encountered the paper again I saw an opportunity to make her approach reproducible by a wider audience since lavaan is available to anyone and its syntax is very intuitive. In this post I translate Iacobucci’s LISREL syntax to lavaan.
Continue reading “Beginning with SEM in lavaan”

Beginning with SEM in lavaan

Streamgraph in R [final]

This post is an update on the previous post translating Byron and Wattenberg’s streamgraphs algorithm into R. Byron and Wattenberg’s algorithm produces beautiful streamgraphs with the synthetic data produced by their streams generator. However, the implementation yields an ugly streamgraph when applied to data which might not be as wiggly as the synthetic ones. In the attempts I made I got very peaky wiggles, not smoothed and irregular. In short the graphs did not transmit the idea of a stream, but of a blurry blob or a peaky primitive bat (the wooden club, not the animal, that would be cool!). In this post I bring-up some points to bear in mind when producing a streamgraph. Continue reading “Streamgraph in R [final]”

Streamgraph in R [final]

Streamgraphs in base::R [e.III]

This is the third post on streamgraph in R. After a simple introduction on how to generate a streamgraphs and an example with actual data it was time for a more general implementation to the creation streamgraphs using R. Continue reading “Streamgraphs in base::R [e.III]”

Streamgraphs in base::R [e.III]

Multiple mediation: extracting output

Lavaan’s output is copious. Especially when fitting a complex model, lavaan’s output is literally a mine of information. Finding what is relevant is not always easy, therefore I will try to describe a way to summarize lavaan’s summary output. Continue reading “Multiple mediation: extracting output”

Multiple mediation: extracting output

Plotting multiple mediation

This posts on multiple mediation on lavaan supplements the two previous ones (1 – introducing multiple mediator analysis with lavaan and 2 – showing an example analysis) by describing how to process lavaan’s output graphically. I discovered the handy package semPlot and I am very positive about it. I will make the example as reproducible as possible, so that each step can be repeated. Also, I am going to try to provide more explanation about the R commands I used because a friend pointed out that the description of the steps was sometimes a bit dry and abstract.
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Plotting multiple mediation

Multiple-mediation example with lavaan

This post extends this previous one on multiple-mediation with lavaan. Here I modeled a ‘real’ dataset instead of a randomly generated one. This dataset we used previously for a paper published some time ago. There we investigated whether fear of an imperfect fat self was a stronger mediator than hope of a perfect thin self on dietary restraint in college women. At the time of the paper’s publication we performed the analysis using the SPSS macro INDIRECT . However,
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Multiple-mediation example with lavaan